Citing PopART or Integer Neighbour-Joining Networks

Leigh, JW, Bryant D (2015). PopART: Full-feature software for haplotype network construction. Methods Ecol Evol 6(9):1110–1116.

Median Joining or Minimum Spanning Networks

Bandelt H, Forster P, Röhl A (1999). Median-joining networks for inferring intraspecific phylogenies. Mol Biol Evol 16(1):37–48.

TCS Networks

Clement M, Snell Q, Walke P, Posada D, Crandall, K (2002). TCS: estimating gene genealogies. Proc 16th Int Parallel Distrib Process Symp 2:184.